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59 changes: 59 additions & 0 deletions patches/@cornerstonejs__adapters.patch
Original file line number Diff line number Diff line change
@@ -1,3 +1,62 @@
diff --git a/dist/esm/adapters/Cornerstone3D/Segmentation/labelmapImagesFromBuffer.js b/dist/esm/adapters/Cornerstone3D/Segmentation/labelmapImagesFromBuffer.js
index db4972221ea40cd1eaad450e9a6334c8eef4ef72..120316e2ac6929810b1da4b5cc4cfb083f0f8ce0 100644
--- a/dist/esm/adapters/Cornerstone3D/Segmentation/labelmapImagesFromBuffer.js
+++ b/dist/esm/adapters/Cornerstone3D/Segmentation/labelmapImagesFromBuffer.js
@@ -552,10 +552,11 @@ function insertPixelDataPlanar(_ref0) {
PerFrameFunctionalGroupsSequence = multiframe.PerFrameFunctionalGroupsSequence,
Rows = multiframe.Rows,
Columns = multiframe.Columns;
- const sharedImageOrientationPatient = SharedFunctionalGroupsSequence.PlaneOrientationSequence ? SharedFunctionalGroupsSequence.PlaneOrientationSequence.ImageOrientationPatient : undefined;
+ const sharedImageOrientationPatient = SharedFunctionalGroupsSequence?.PlaneOrientationSequence ? SharedFunctionalGroupsSequence.PlaneOrientationSequence.ImageOrientationPatient : undefined;
const sliceLength = Columns * Rows;
- const metadataFrameCount = Number(multiframe.NumberOfFrames) || PerFrameFunctionalGroupsSequence.length;
- const groupsLenFromMetadata = PerFrameFunctionalGroupsSequence.length || metadataFrameCount;
+ const perFrameLength = PerFrameFunctionalGroupsSequence?.length || 0;
+ const metadataFrameCount = Number(multiframe.NumberOfFrames) || perFrameLength;
+ const groupsLenFromMetadata = perFrameLength || metadataFrameCount;
const groupsLen = typeof decodedFrameCount === 'number' ? Math.min(groupsLenFromMetadata, decodedFrameCount) : groupsLenFromMetadata;
let overlapping = false;
return new Promise(resolve => {
@@ -564,7 +565,7 @@ function insertPixelDataPlanar(_ref0) {
const processChunk = firstIndex => {
for (let i = firstIndex; i < firstIndex + imagesPerChunk && i < groupsLen; i++) {
var _PerFrameFunctionalGr;
- const PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[i];
+ const PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence?.[i];
const ImageOrientationPatientI = sharedImageOrientationPatient || (PerFrameFunctionalGroups === null || PerFrameFunctionalGroups === void 0 || (_PerFrameFunctionalGr = PerFrameFunctionalGroups.PlaneOrientationSequence) === null || _PerFrameFunctionalGr === void 0 ? void 0 : _PerFrameFunctionalGr.ImageOrientationPatient);
if (!ImageOrientationPatientI) {
throw new Error("SEG frame ".concat(i + 1, " is missing ImageOrientationPatient in per-frame and shared functional groups."));
@@ -817,7 +818,7 @@ function insertOverlappingPixelDataPlanar(_ref12) {
PerFrameFunctionalGroupsSequence = multiframe.PerFrameFunctionalGroupsSequence,
Rows = multiframe.Rows,
Columns = multiframe.Columns;
- const sharedImageOrientationPatient = SharedFunctionalGroupsSequence.PlaneOrientationSequence ? SharedFunctionalGroupsSequence.PlaneOrientationSequence.ImageOrientationPatient : undefined;
+ const sharedImageOrientationPatient = SharedFunctionalGroupsSequence?.PlaneOrientationSequence ? SharedFunctionalGroupsSequence.PlaneOrientationSequence.ImageOrientationPatient : undefined;
const sliceLength = Columns * Rows;
const arrayOfSegmentData = getArrayOfSegmentData({
sliceLength,
@@ -910,7 +911,7 @@ const getSegmentData = _ref14 => {
for (let currentLabelMapImageIndex = 0; currentLabelMapImageIndex < labelMapImages.length; currentLabelMapImageIndex++) {
const currentLabelMapImage = labelMapImages[currentLabelMapImageIndex];
const referencedImageId = currentLabelMapImage.referencedImageId;
- const PerFrameFunctionalGroupsIndex = PerFrameFunctionalGroupsSequence.findIndex((PerFrameFunctionalGroups, currentSequenceIndex) => {
+ const PerFrameFunctionalGroupsIndex = PerFrameFunctionalGroupsSequence?.findIndex((PerFrameFunctionalGroups, currentSequenceIndex) => {
const _extractInfoFromPerFr = extractInfoFromPerFrameFunctionalGroups({
PerFrameFunctionalGroups,
sequenceIndex: currentSequenceIndex,
@@ -922,10 +923,10 @@ const getSegmentData = _ref14 => {
const isCorrectPerFrameFunctionalGroup = groupsSegmentIndex === segmentIndex && groupsReferenceImageId === currentLabelMapImage.referencedImageId;
return isCorrectPerFrameFunctionalGroup;
});
- if (PerFrameFunctionalGroupsIndex === -1) {
+ if (PerFrameFunctionalGroupsIndex === -1 || PerFrameFunctionalGroupsIndex === undefined) {
continue;
}
- const PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence[PerFrameFunctionalGroupsIndex];
+ const PerFrameFunctionalGroups = PerFrameFunctionalGroupsSequence?.[PerFrameFunctionalGroupsIndex];
const alignedPixelDataI = getAlignedPixelData({
sharedImageOrientationPatient,
PerFrameFunctionalGroups,
diff --git a/dist/esm/adapters/helpers/checkOrientation.js b/dist/esm/adapters/helpers/checkOrientation.js
index f147ce19972dfe2f30ed820509943bb2ab2f34d0..47868b5ae063ee61e4061aa46ef5ccf49692fb34 100644
--- a/dist/esm/adapters/helpers/checkOrientation.js
Expand Down
12 changes: 6 additions & 6 deletions pnpm-lock.yaml

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