(re-)add provenance recording to new data model

docs/adr/hermes-prov-diagram/hermes-prov.drawio.license

@@ -0,0 +1,3 @@
+SPDX-FileCopyrightText: 2026 German Aerospace Center (DLR)
+
+SPDX-License-Identifier: CC-BY-SA-4.0

docs/adr/hermes-prov-diagram/hermes-prov.svg.license

@@ -0,0 +1,3 @@
+SPDX-FileCopyrightText: 2026 German Aerospace Center (DLR)
+
+SPDX-License-Identifier: CC-BY-SA-4.0

docs/source/adr/0012-overall-data-model-design.md

@@ -22,13 +22,13 @@ Superseded: we no longer need to serialize additional information like provenanc
 ## Considered Options
 
 * One common model for all stages
-* Seperate model for different stages
+* Separate model for different stages
 * Common model for all stages
 * Processing model and curated model
 
 ## Decision Outcome
 
-Chosen option: "Seperate model for different stages", because comes out best.
+Chosen option: "Separate model for different stages", because comes out best.
 
 ## Pros and Cons of the Options
 

docs/source/conf.py

@@ -28,6 +28,7 @@
 sys.path.insert(0, os.path.abspath('../../src'))
 sys.path.append(os.path.abspath('_ext'))
 
+
 def read_from_pyproject(file_path="../../pyproject.toml"):
     """
     Reads the metadata from the pyproject.toml file.
@@ -51,6 +52,7 @@ def read_from_pyproject(file_path="../../pyproject.toml"):
     except Exception as e:
         return f"An unexpected error occurred: {e}"
 
+
 def read_authors_from_pyproject():
     metadata = read_from_pyproject()
     authors = metadata.get("authors", [])
@@ -59,6 +61,7 @@ def read_authors_from_pyproject():
     # Convert the list of authors to a comma-separated string
     return ", ".join([author["name"] for author in authors])
 
+
 def read_version_from_pyproject():
     metadata = read_from_pyproject()
     version = metadata.get("version", "")
@@ -70,7 +73,8 @@ def read_version_from_pyproject():
 # -- Project information -----------------------------------------------------
 
 project = 'HERMES Workflow'
-copyright = '2025 by Forschungszentrum Jülich (FZJ), German Aerospace Center (DLR) and Helmholtz-Zentrum Dresden-Rossendorf (HZDR)'
+copyright = '2025 by Forschungszentrum Jülich (FZJ), German Aerospace Center (DLR)' \
+            ' and Helmholtz-Zentrum Dresden-Rossendorf (HZDR)'
 author = read_authors_from_pyproject()
 
 # The full version, including alpha/beta/rc tags
@@ -191,6 +195,7 @@ def read_version_from_pyproject():
 # TODO: remove this workaround and remove "undoc-members" from autoapi_options once everything is documented
 # This removes all generated entries for known documented classes (because autoapi will add all attributes
 # it finds in the code no matter if they are described in a class doc string or not).
+
 def autoapi_skip_member(app, obj_type, name, obj, skip, options):
     if obj_type == "attribute":
         if any(documented_type in obj.id for documented_type in [
@@ -201,5 +206,6 @@ def autoapi_skip_member(app, obj_type, name, obj, skip, options):
 
     return skip
 
+
 def setup(app):
     app.connect("autoapi-skip-member", autoapi_skip_member)

hermes.toml

@@ -5,6 +5,9 @@
 [harvest]
 sources = [ "cff", "toml" ] # ordered priority (first one is most important)
 
+[process]
+plugins = [ "invenio", "codemeta" ]
+
 [curate]
 plugin = "pass_curate"
 

pyproject.toml

@@ -69,11 +69,14 @@ rodare = "hermes.commands.deposit.rodare:RodareDepositPlugin"
 [project.entry-points."hermes.postprocess"]
 config_invenio_record_id = "hermes.commands.postprocess.invenio:config_record_id"
 config_invenio_rdm_record_id = "hermes.commands.postprocess.invenio_rdm:config_record_id"
-cff_doi = "hermes.commands.postprocess.invenio:cff_doi"
-codemeta_doi = "hermes.commands.postprocess.invenio:codemeta_doi"
+invenio_cff_doi = "hermes.commands.postprocess.invenio:cff_doi"
+invenio_rdm_cff_doi = "hermes.commands.postprocess.invenio_rdm:cff_doi"
+invenio_codemeta_doi = "hermes.commands.postprocess.invenio:codemeta_doi"
+invenio_rdm_codemeta_doi = "hermes.commands.postprocess.invenio_rdm:codemeta_doi"
 
 [project.entry-points."hermes.process"]
 codemeta = "hermes.commands.process.standard_merge:CodemetaProcessPlugin"
+invenio = "hermes.commands.process.invenio_merge:InvenioProcessPlugin"
 
 [project.entry-points."hermes.curate"]
 pass_curate = "hermes.commands.curate.pass_curate:PassCuratePlugin"

src/hermes/commands/__init__.py

@@ -17,3 +17,4 @@
 from hermes.commands.process.base import HermesProcessCommand
 from hermes.commands.deposit.base import HermesDepositCommand
 from hermes.commands.postprocess.base import HermesPostprocessCommand
+from hermes.commands.report.base import HermesReportCommand