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@molgenis

MOLGENIS - open source solutions for scientific data

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  1. molgenis-emx2 molgenis-emx2 Public

    MOLGENIS EMX2, the latest version of the MOLGENIS data platform.

    Java 26 27

  2. molgenis-service-armadillo molgenis-service-armadillo Public

    Armadillo; a DataSHIELD implementation, part of the MOLGENIS suite

    Java 11 11

  3. systemsgenetics systemsgenetics Public

    Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool

    Java 184 99

  4. vip vip Public

    Variant Interpretation Pipeline

    Shell 52 9

  5. molgenis molgenis Public

    MOLGENIS - for scientific data: management, exploration, integration and analysis.

    Java 122 96

Repositories

Showing 10 of 208 repositories
  • ansible-pipelines Public
    molgenis/ansible-pipelines's past year of commit activity
    Python 7 GPL-3.0 9 0 1 Updated Oct 2, 2026
  • take-it-easyconfigs Public
    molgenis/take-it-easyconfigs's past year of commit activity
    Perl 0 9 0 9 Updated Oct 2, 2026
  • vip-annotate Public

    Variant Call Format (VCF) file annotation

    molgenis/vip-annotate's past year of commit activity
    Java 1 LGPL-3.0 0 0 0 Updated Oct 2, 2026
  • molgenis-emx2 Public

    MOLGENIS EMX2, the latest version of the MOLGENIS data platform.

    molgenis/molgenis-emx2's past year of commit activity
    Java 26 LGPL-3.0 27 334 (3 issues need help) 104 Updated Oct 2, 2026
  • NGS_Automated Public
    molgenis/NGS_Automated's past year of commit activity
    Shell 4 LGPL-3.0 8 15 0 Updated Oct 2, 2026
  • vip Public

    Variant Interpretation Pipeline

    molgenis/vip's past year of commit activity
    Shell 52 LGPL-3.0 9 2 9 Updated Oct 2, 2026
  • NGS_RNA Public
    molgenis/NGS_RNA's past year of commit activity
    Shell 5 LGPL-3.0 9 0 0 Updated Oct 2, 2026
  • league-of-robots Public

    Code and configs for deploying (virtual) HPC clusters.

    molgenis/league-of-robots's past year of commit activity
    Shell 5 GPL-3.0 12 2 6 Updated Oct 2, 2026
  • nf_ngs_dna Public
    molgenis/nf_ngs_dna's past year of commit activity
    Shell 0 3 1 0 Updated Sep 30, 2026
  • asterix Public

    Automated PGx pipeline

    molgenis/asterix's past year of commit activity
    R 2 2 0 6 Updated Sep 30, 2026
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