Pinned Loading

1. synth-pdb synth-pdb Public

   Generate realistic PDB files with mixed secondary structures for testing, education and bioinformatics tool development

   Python 1

2. synth-nmr synth-nmr Public

   NMR spectroscopy calculations for protein structures

   Python 1

3. diff-biophys diff-biophys Public

   Differentiable biophysical modeling in JAX (SAXS, NMR, CD)

   Python 1

4. synth-saxs synth-saxs Public

   A lightweight Python library for simulating Small-Angle X-ray Scattering (SAXS) profiles from protein coordinates.

   Python 1

5. TorsionTuner TorsionTuner Public

   GNN-based protein structure refinement using JAX-differentiable kinematics to fit solution-state experimental data (SAXS/NMR).

   Python 1

6. diff-ensemble diff-ensemble Public

   Differentiable VAE framework for predicting protein structural ensembles (IDPs) consistent with SAXS and NMR data. Built on JAX/Flax.

   Python 1