On line 366 in the section Correlate factors with covariates there seems to be a typo.
"We see that Factor 4 is strongly associated with the number of expressed genes per cell and the Factors 1 and 7 are associated with the number of accessible peaks per cell"
But the plot seems to indicate the opposite. Unless I misunderstood the plot entirely, which could happen)
I'd make a PR, but seems it's better for you to regenerate the HTML yourself.
On line 366 in the section
Correlate factors with covariatesthere seems to be a typo."We see that Factor 4 is strongly associated with the number of expressed genes per cell and the Factors 1 and 7 are associated with the number of accessible peaks per cell"
But the plot seems to indicate the opposite. Unless I misunderstood the plot entirely, which could happen)
I'd make a PR, but seems it's better for you to regenerate the HTML yourself.