CodeQL Advanced

codeql-analysis.yml

574 workflow runs

ci: observe Python 3.12 full-dependency resolution
requires action with the application:
CodeQL Advanced#11547:Pull request#9140synchronizebyagourakis82
agourakis82:9069-py312-full-dep-observability
Oct 7, 2026Action required
Add translate_relative option to RandAffine for relative translation ranges
requires action with the application:
CodeQL Advanced#11546:Pull request#9157synchronizebypre-commit-ci[bot]Bot
habib-analyst:feat-translate-relative-6558
Oct 7, 2026Action required
Add translate_relative option to RandAffine for relative translation ranges
requires action with the application:
CodeQL Advanced#11545:Pull request#9157openedbyhabib-analyst
habib-analyst:feat-translate-relative-6558
Oct 7, 2026Action required
fix(metrics): stop passing deprecated always_return_as_numpy internal…
completed successfully:
CodeQL Advanced#11544:Commit9a6ac14pushedbyericspod
dev
Oct 7, 20261m 49s
Torchscript deprecation
completed successfully:
CodeQL Advanced#11543:Pull request#8777synchronizebyaymuos15
aymuos15:torchscript_deprecation
Oct 7, 20262m 6s
fix(nets): thread ResNet norm/act into residual blocks and guard non-affine init
completed successfully:
CodeQL Advanced#11542:Pull request#9028synchronizebyaymuos15
aymuos15:fix/resnet-norm-act-threading
Oct 7, 20261m 53s
fix(metrics): stop passing deprecated always_return_as_numpy internally (Fixes #9059)
completed successfully:
CodeQL Advanced#11541:Pull request#9060synchronizebyericspod
venki-drn:fix/issue-9059-internal-deprecated-arg
Oct 7, 20261m 33s
Fix Pad.inverse channel-dimension back-crop
completed successfully:
CodeQL Advanced#11540:Pull request#8900synchronizebyaymuos15
aymuos15:fix/pad-inverse-channel-crop
Oct 7, 202613m 11s
Add in_memory option to PersistentDataset for hybrid caching
completed successfully:
CodeQL Advanced#11539:Pull request#8691synchronizebyaymuos15
aymuos15:6753-persistent-dataset-in-memory-cache
Oct 7, 202615m 21s
docs: clarify volumetric array axis order is WHD (X,Y,Z), not HWD
completed successfully:
CodeQL Advanced#11538:Pull request#8826synchronizebyaymuos15
aymuos15:fix-8337-whd-docs
Oct 7, 20263m 18s
Fix 3D decomposed relative position embedding for anisotropic inputs
completed successfully:
CodeQL Advanced#11537:Pull request#8890synchronizebyaymuos15
aymuos15:fix-3d-decomposed-relpos-einsum
Oct 7, 20264m 44s
Add randomize_per_key option to random dict transforms (#7561)
completed successfully:
CodeQL Advanced#11536:Pull request#8959synchronizebyaymuos15
aymuos15:feat/7561-per-key-randomize
Oct 7, 20263m 59s
fix(nets): thread ResNet norm/act into residual blocks and guard non-affine init
completed successfully:
CodeQL Advanced#11535:Pull request#9028synchronizebyaymuos15
aymuos15:fix/resnet-norm-act-threading
Oct 7, 20263m 34s
Perf(test): load inverse-collation fixtures once at class level
completed successfully:
CodeQL Advanced#11534:Pull request#9040synchronizebyaymuos15
aymuos15:perf/inverse-collation-fixtures-classlevel
Oct 7, 20262m 30s
perf(visualize): batch SmoothGrad noise samples with chunked forward
completed successfully:
CodeQL Advanced#11533:Pull request#9064synchronizebyaymuos15
aymuos15:perf/smoothgrad-batched
Oct 7, 20262m 32s
feat(transforms): add MarchingCubes surface extraction
completed successfully:
CodeQL Advanced#11532:Pull request#9107synchronizebyaymuos15
aymuos15:feat/7169-marching-cubes
Oct 7, 20263m 8s
fix(networks): honor explicit padding=0 in ResidualUnit
completed successfully:
CodeQL Advanced#11531:Pull request#9118synchronizebyaymuos15
aymuos15:fix/residualunit-padding-zero
Oct 7, 20262m 11s
Add Primus (V3) transformer segmentation network
completed successfully:
CodeQL Advanced#11530:Pull request#9123synchronizebyaymuos15
aymuos15:primus-v3
Oct 7, 20262m 4s
feat(networks): opt-in native-resolution deep supervision output for DynUNet
completed successfully:
CodeQL Advanced#11529:Pull request#9127synchronizebyaymuos15
aymuos15:feat/dynunet-deep-supervision-list
Oct 7, 20262m 8s
Perf: vectorize _get_pairwise_iou with a joint bincount
completed successfully:
CodeQL Advanced#11528:Pull request#9004synchronizebyaymuos15
aymuos15:perf/panoptic-pairwise-iou-bincount
Oct 7, 20262m 0s
Perf: vectorize _get_pairwise_iou with a joint bincount
completed successfully:
CodeQL Advanced#11527:Pull request#9004synchronizebyaymuos15
aymuos15:perf/panoptic-pairwise-iou-bincount
Oct 7, 20261m 29s
Allow rel_pos_embedding with use_flash_attention in SABlock and CrossAttentionBlock
completed successfully:
CodeQL Advanced#11526:Pull request#8842synchronizebyaymuos15
aymuos15:fix-7997-flash-relpos
Oct 7, 20261m 50s
Allow rel_pos_embedding with use_flash_attention in SABlock and CrossAttentionBlock
completed successfully:
CodeQL Advanced#11525:Pull request#8842synchronizebyaymuos15
aymuos15:fix-7997-flash-relpos
Oct 7, 20262m 11s
fix(metrics): return the minimum for Hausdorff percentile=0
completed successfully:
CodeQL Advanced#11524:Pull request#9033synchronizebyaymuos15
aymuos15:fix/hausdorff-percentile-zero
Oct 7, 20262m 6s
fix(metrics): return the minimum for Hausdorff percentile=0
completed successfully:
CodeQL Advanced#11523:Pull request#9033synchronizebyaymuos15
aymuos15:fix/hausdorff-percentile-zero
Oct 7, 20262m 6s

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CodeQL Advanced

574 workflow runs

ci: observe Python 3.12 full-dependency resolution

Add translate_relative option to RandAffine for relative translation ranges

Add translate_relative option to RandAffine for relative translation ranges

fix(metrics): stop passing deprecated always_return_as_numpy internal…

Torchscript deprecation

fix(nets): thread ResNet norm/act into residual blocks and guard non-affine init

fix(metrics): stop passing deprecated always_return_as_numpy internally (Fixes #9059)

Fix Pad.inverse channel-dimension back-crop

Add in_memory option to PersistentDataset for hybrid caching

docs: clarify volumetric array axis order is WHD (X,Y,Z), not HWD

Fix 3D decomposed relative position embedding for anisotropic inputs

Add randomize_per_key option to random dict transforms (#7561)

fix(nets): thread ResNet norm/act into residual blocks and guard non-affine init

Perf(test): load inverse-collation fixtures once at class level

perf(visualize): batch SmoothGrad noise samples with chunked forward

feat(transforms): add MarchingCubes surface extraction

fix(networks): honor explicit padding=0 in ResidualUnit

Add Primus (V3) transformer segmentation network

feat(networks): opt-in native-resolution deep supervision output for DynUNet

Perf: vectorize `_get_pairwise_iou` with a joint bincount

Perf: vectorize `_get_pairwise_iou` with a joint bincount

Allow rel_pos_embedding with use_flash_attention in SABlock and CrossAttentionBlock

Allow rel_pos_embedding with use_flash_attention in SABlock and CrossAttentionBlock

fix(metrics): return the minimum for Hausdorff percentile=0

fix(metrics): return the minimum for Hausdorff percentile=0

Workflow runs for CodeQL Advanced

574 workflow runs