Skip to content

ci(deps): bump the github-actions group across 6 directories with 9 updates - #828

Merged
d-morrison merged 1 commit into
mainfrom
dependabot/github_actions/github-actions-743de4f73e
Sep 6, 2026
Merged

ci(deps): bump the github-actions group across 6 directories with 9 updates#828
d-morrison merged 1 commit into
mainfrom
dependabot/github_actions/github-actions-743de4f73e

Conversation

@dependabot

@dependabot dependabot Bot commented on behalf of github Sep 5, 2026

Copy link
Copy Markdown
Contributor

Bumps the github-actions group with 9 updates in the / directory:

Package From To
r-lib/actions/setup-r 2.12.1 2.13.0
r-lib/actions/setup-r-dependencies 2.12.1 2.13.0
anthropics/claude-code-action 1.0.206 1.0.214
r-lib/actions/setup-pandoc 2.12.1 2.13.0
r-lib/actions/setup-renv 2.12.1 2.13.0
r-lib/actions/check-r-package 2.12.1 2.13.0
actions/ai-inference 2.1.1 3
r-lib/actions/pr-fetch 2.12.1 2.13.0
r-lib/actions/pr-push 2.12.1 2.13.0

Bumps the github-actions group with 1 update in the /.github/actions/run-claude-review-attempt directory: anthropics/claude-code-action.
Bumps the github-actions group with 2 updates in the /check-bibliography-dois directory: r-lib/actions/setup-r and r-lib/actions/setup-r-dependencies.
Bumps the github-actions group with 3 updates in the /preview directory: r-lib/actions/setup-r, r-lib/actions/setup-r-dependencies and r-lib/actions/setup-renv.
Bumps the github-actions group with 3 updates in the /quarto-publish directory: r-lib/actions/setup-r, r-lib/actions/setup-r-dependencies and r-lib/actions/setup-renv.
Bumps the github-actions group with 2 updates in the /test-coverage directory: r-lib/actions/setup-r and r-lib/actions/setup-r-dependencies.

Updates r-lib/actions/setup-r from 2.12.1 to 2.13.0

Changelog

Sourced from r-lib/actions/setup-r's changelog.

v2.13.0 (2026-08028)

  • [setup-r] now retries r-hub.io HTTP failures (#1088, @​nbenn).

  • [setup-r] now sets the correct RTOOLS environment variables on aarch64 Windows (@​vjymisal0, #1104).

  • [setup-r] keep repositories if they are set by the build. E.g. aarch64 Windows builds now set them (@​jeroen, #1101).

  • [setup-r] now retries transient failures when resolving the R version from api.r-hub.io, rather than failing the job on the first timeout or server error (@​nbenn, #1086).

  • [setup-r-dependencies] now switches back to classic sudo, if available, on Linux. This fixes installing pak on Ubuntu 26.04 runners (@​jeroen, #1096).

v2.12.1 (2026-06-23)

  • [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

  • [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

  • Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

  • New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

  • All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

  • [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

  • It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

  • [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

  • [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

... (truncated)

Commits
  • 465b7d8 NEWS for 2.13.0 (#1105)
  • d06a540 [setup-r] retry transient r-hub.io request failures (#1088)
  • ed9aa85 fix(setup-r): export correct RTOOLS HOME env vars on Windows ARM64 and x64 (#...
  • c86f32c setup-r-dependencies: set JAVA_HOME on Windows runners from Java 21 env vars ...
  • 2a66450 setup-r-dependencies: switch back to classic sudo on runners with sudo-rs (#1...
  • 5cc1f0d Fix minor typo (#1098)
  • 33d09fb fix: Remove stray ::group:: (#1103)
  • aae88a2 Special-case CRAN mirror for Windows ARM64 (#1101)
  • b7484da [setup-r] Support installing RTools without installing R (#1093)
  • See full diff in compare view

Updates r-lib/actions/setup-r-dependencies from 2.12.1 to 2.13.0

Changelog

Sourced from r-lib/actions/setup-r-dependencies's changelog.

v2.13.0 (2026-08028)

  • [setup-r] now retries r-hub.io HTTP failures (#1088, @​nbenn).

  • [setup-r] now sets the correct RTOOLS environment variables on aarch64 Windows (@​vjymisal0, #1104).

  • [setup-r] keep repositories if they are set by the build. E.g. aarch64 Windows builds now set them (@​jeroen, #1101).

  • [setup-r] now retries transient failures when resolving the R version from api.r-hub.io, rather than failing the job on the first timeout or server error (@​nbenn, #1086).

  • [setup-r-dependencies] now switches back to classic sudo, if available, on Linux. This fixes installing pak on Ubuntu 26.04 runners (@​jeroen, #1096).

v2.12.1 (2026-06-23)

  • [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

  • [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

  • Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

  • New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

  • All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

  • [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

  • It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

  • [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

  • [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

... (truncated)

Commits
  • 465b7d8 NEWS for 2.13.0 (#1105)
  • d06a540 [setup-r] retry transient r-hub.io request failures (#1088)
  • ed9aa85 fix(setup-r): export correct RTOOLS HOME env vars on Windows ARM64 and x64 (#...
  • c86f32c setup-r-dependencies: set JAVA_HOME on Windows runners from Java 21 env vars ...
  • 2a66450 setup-r-dependencies: switch back to classic sudo on runners with sudo-rs (#1...
  • 5cc1f0d Fix minor typo (#1098)
  • 33d09fb fix: Remove stray ::group:: (#1103)
  • aae88a2 Special-case CRAN mirror for Windows ARM64 (#1101)
  • b7484da [setup-r] Support installing RTools without installing R (#1093)
  • See full diff in compare view

Updates anthropics/claude-code-action from 1.0.206 to 1.0.214

Release notes

Sourced from anthropics/claude-code-action's releases.

v1.0.214

Full Changelog: anthropics/claude-code-action@v1.0.213...v1.0.214

v1.0.213

Full Changelog: anthropics/claude-code-action@v1.0.212...v1.0.213

v1.0.212

Full Changelog: anthropics/claude-code-action@v1.0.211...v1.0.212

v1.0.211

Full Changelog: anthropics/claude-code-action@v1.0.210...v1.0.211

v1.0.210

Full Changelog: anthropics/claude-code-action@v1.0.209...v1.0.210

v1.0.209

Full Changelog: anthropics/claude-code-action@v1.0.208...v1.0.209

v1.0.208

Full Changelog: anthropics/claude-code-action@v1.0.207...v1.0.208

v1.0.207

Full Changelog: anthropics/claude-code-action@v1.0.206...v1.0.207

Commits
  • fa2b266 chore: bump Claude Code to 2.1.259 and Agent SDK to 0.3.259
  • 8251c10 chore: bump Claude Code to 2.1.258 and Agent SDK to 0.3.258
  • 781d62e chore: bump Claude Code to 2.1.257 and Agent SDK to 0.3.257
  • 833fb0f chore: bump Claude Code to 2.1.252 and Agent SDK to 0.3.252
  • a874e9e chore: bump Claude Code to 2.1.251 and Agent SDK to 0.3.251
  • a60f3e1 chore: bump Claude Code to 2.1.250 and Agent SDK to 0.3.250
  • e8c2d7c chore: bump Claude Code to 2.1.248 and Agent SDK to 0.3.248
  • 70fec18 chore: bump Claude Code to 2.1.247 and Agent SDK to 0.3.247
  • See full diff in compare view

Updates r-lib/actions/setup-pandoc from 2.12.1 to 2.13.0

Changelog

Sourced from r-lib/actions/setup-pandoc's changelog.

v2.13.0 (2026-08028)

  • [setup-r] now retries r-hub.io HTTP failures (#1088, @​nbenn).

  • [setup-r] now sets the correct RTOOLS environment variables on aarch64 Windows (@​vjymisal0, #1104).

  • [setup-r] keep repositories if they are set by the build. E.g. aarch64 Windows builds now set them (@​jeroen, #1101).

  • [setup-r] now retries transient failures when resolving the R version from api.r-hub.io, rather than failing the job on the first timeout or server error (@​nbenn, #1086).

  • [setup-r-dependencies] now switches back to classic sudo, if available, on Linux. This fixes installing pak on Ubuntu 26.04 runners (@​jeroen, #1096).

v2.12.1 (2026-06-23)

  • [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

  • [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

  • Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

  • New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

  • All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

  • [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

  • It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

  • [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

  • [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

... (truncated)

Commits
  • 465b7d8 NEWS for 2.13.0 (#1105)
  • d06a540 [setup-r] retry transient r-hub.io request failures (#1088)
  • ed9aa85 fix(setup-r): export correct RTOOLS HOME env vars on Windows ARM64 and x64 (#...
  • c86f32c setup-r-dependencies: set JAVA_HOME on Windows runners from Java 21 env vars ...
  • 2a66450 setup-r-dependencies: switch back to classic sudo on runners with sudo-rs (#1...
  • 5cc1f0d Fix minor typo (#1098)
  • 33d09fb fix: Remove stray ::group:: (#1103)
  • aae88a2 Special-case CRAN mirror for Windows ARM64 (#1101)
  • b7484da [setup-r] Support installing RTools without installing R (#1093)
  • See full diff in compare view

Updates r-lib/actions/setup-renv from 2.12.1 to 2.13.0

Changelog

Sourced from r-lib/actions/setup-renv's changelog.

v2.13.0 (2026-08028)

  • [setup-r] now retries r-hub.io HTTP failures (#1088, @​nbenn).

  • [setup-r] now sets the correct RTOOLS environment variables on aarch64 Windows (@​vjymisal0, #1104).

  • [setup-r] keep repositories if they are set by the build. E.g. aarch64 Windows builds now set them (@​jeroen, #1101).

  • [setup-r] now retries transient failures when resolving the R version from api.r-hub.io, rather than failing the job on the first timeout or server error (@​nbenn, #1086).

  • [setup-r-dependencies] now switches back to classic sudo, if available, on Linux. This fixes installing pak on Ubuntu 26.04 runners (@​jeroen, #1096).

v2.12.1 (2026-06-23)

  • [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

  • [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

  • Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

  • New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

  • All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

  • [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

  • It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

  • [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

  • [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

... (truncated)

Commits
  • 465b7d8 NEWS for 2.13.0 (#1105)
  • d06a540 [setup-r] retry transient r-hub.io request failures (#1088)
  • ed9aa85 fix(setup-r): export correct RTOOLS HOME env vars on Windows ARM64 and x64 (#...
  • c86f32c setup-r-dependencies: set JAVA_HOME on Windows runners from Java 21 env vars ...
  • 2a66450 setup-r-dependencies: switch back to classic sudo on runners with sudo-rs (#1...
  • 5cc1f0d Fix minor typo (#1098)
  • 33d09fb fix: Remove stray ::group:: (#1103)
  • aae88a2 Special-case CRAN mirror for Windows ARM64 (#1101)
  • b7484da [setup-r] Support installing RTools without installing R (#1093)
  • See full diff in compare view

Updates r-lib/actions/check-r-package from 2.12.1 to 2.13.0

Changelog

Sourced from r-lib/actions/check-r-package's changelog.

v2.13.0 (2026-08028)

  • [setup-r] now retries r-hub.io HTTP failures (#1088, @​nbenn).

  • [setup-r] now sets the correct RTOOLS environment variables on aarch64 Windows (@​vjymisal0, #1104).

  • [setup-r] keep repositories if they are set by the build. E.g. aarch64 Windows builds now set them (@​jeroen, #1101).

  • [setup-r] now retries transient failures when resolving the R version from api.r-hub.io, rather than failing the job on the first timeout or server error (@​nbenn, #1086).

  • [setup-r-dependencies] now switches back to classic sudo, if available, on Linux. This fixes installing pak on Ubuntu 26.04 runners (@​jeroen, #1096).

v2.12.1 (2026-06-23)

  • [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

  • [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

  • Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

  • New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

  • All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

  • [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

  • It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

  • [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

  • [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

... (truncated)

Commits
  • 465b7d8 NEWS for 2.13.0 (#1105)
  • d06a540 [setup-r] retry transient r-hub.io request failures (#1088)
  • ed9aa85 fix(setup-r): export correct RTOOLS HOME env vars on Windows ARM64 and x64 (#...
  • c86f32c setup-r-dependencies: set JAVA_HOME on Windows runners from Java 21 env vars ...
  • 2a66450 setup-r-dependencies: switch back to classic sudo on runners with sudo-rs (#1...
  • 5cc1f0d Fix minor typo (#1098)
  • 33d09fb fix: Remove stray ::group:: (#1103)
  • aae88a2 Special-case CRAN mirror for Windows ARM64 (#1101)
  • b7484da [setup-r] Support installing RTools without installing R (#1093)
  • See full diff in compare view

Updates actions/ai-inference from 2.1.1 to 3

Release notes

Sourced from actions/ai-inference's releases.

v3

What's Changed

New Contributors

Full Changelog: actions/ai-inference@v2...v3

Commits
  • 2c43c91 Merge pull request #236 from jalafel/jalafel/delete-github-models
  • 0ac1e35 refine test response
  • aacc9f2 Fix local actions test with mock Copilot CLI
  • 8359fe6 add step to ci to install copilot cli
  • 498d1c1 Refresh Licensed cache
  • 9bd16ce Merge remote-tracking branch 'upstream/main' into jalafel/delete-github-models
  • 5709758 run prettier on README.md
  • 726535a Merge pull request #237 from actions/dependabot/npm_and_yarn/npm-development-...
  • 396a40a chore(deps-dev): bump the npm-development group across 1 directory with 7 upd...
  • b246edc Merge pull request #232 from actions/dependabot/npm_and_yarn/tmp-0.2.6
  • Additional commits viewable in compare view

Updates r-lib/actions/pr-fetch from 2.12.1 to 2.13.0

Changelog

Sourced from r-lib/actions/pr-fetch's changelog.

v2.13.0 (2026-08028)

  • [setup-r] now retries r-hub.io HTTP failures (#1088, @​nbenn).

  • [setup-r] now sets the correct RTOOLS environment variables on aarch64 Windows (@​vjymisal0, #1104).

  • [setup-r] keep repositories if they are set by the build. E.g. aarch64 Windows builds now set them (@​jeroen, #1101).

  • [setup-r] now retries transient failures when resolving the R version from api.r-hub.io, rather than failing the job on the first timeout or server error (@​nbenn, #1086).

  • [setup-r-dependencies] now switches back to classic sudo, if available, on Linux. This fixes installing pak on Ubuntu 26.04 runners (@​jeroen, #1096).

v2.12.1 (2026-06-23)

  • [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

  • [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

  • Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

  • New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

  • All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

  • [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

  • It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

  • [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

  • [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

... (truncated)

Commits
  • 465b7d8 NEWS for 2.13.0 (#1105)
  • d06a540 [setup-r] retry transient r-hub.io request failures (#1088)
  • ed9aa85 fix(setup-r): export correct RTOOLS HOME env vars on Windows ARM64 and x64 (#...
  • c86f32c setup-r-dependencies: set JAVA_HOME on Windows runners from Java 21 env vars ...
  • 2a66450 setup-r-dependencies: switch back to classic sudo on runners with sudo-rs (#1...
  • 5cc1f0d Fix minor typo (#1098)
  • 33d09fb fix: Remove stray ::group:: (#1103)
  • aae88a2 Special-case CRAN mirror for Windows ARM64 (#1101)
  • b7484da [setup-r] Support installing RTools without installing R (#1093)
  • See full diff in compare view

Updates r-lib/actions/pr-push from 2.12.1 to 2.13.0

Changelog

Sourced from r-lib/actions/pr-push's changelog.

v2.13.0 (2026-08028)

  • [setup-r] now retries r-hub.io HTTP failures (#1088, @​nbenn).

  • [setup-r] now sets the correct RTOOLS environment variables on aarch64 Windows (@​vjymisal0, #1104).

  • [setup-r] keep repositories if they are set by the build. E.g. aarch64 Windows builds now set them (@​jeroen, #1101).

  • [setup-r] now retries transient failures when resolving the R version from api.r-hub.io, rather than failing the job on the first timeout or server error (@​nbenn, #1086).

  • [setup-r-dependencies] now switches back to classic sudo, if available, on Linux. This fixes installing pak on Ubuntu 26.04 runners (@​jeroen, #1096).

v2.12.1 (2026-06-23)

  • [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

  • [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

  • Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

  • New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

  • All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

  • [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

  • It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

  • [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

  • [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

... (truncated)

Commits
  • 465b7d8 NEWS for 2.13.0 (#1105)
  • d06a540 [setup-r] retry transient r-hub.io request failures (#1088)
  • ed9aa85 fix(setup-r): export correct RTOOLS HOME env vars on Windows ARM64 and x64 (#...
  • c86f32c setup-r-dependencies: set JAVA_HOME on Windows runners from Java 21 env vars ...
  • 2a66450 setup-r-dependencies: switch back to classic sudo on runners with sudo-rs (#1...
  • 5cc1f0d Fix minor typo (#1098)
  • 33d09fb fix: Remove stray ::group:: (#1103)
  • aae88a2 Special-case CRAN mirror for Windows ARM64 (#1101)
  • b7484da [setup-r] Support installing RTools without installing R (#1093)
  • See full diff in compare view

Updates anthropics/claude-code-action from 1.0.206 to 1.0.214

Release notes

Sourced from anthropics/claude-code-action's releases.

v1.0.214

Full Changelog: anthropics/claude-code-action@v1.0.213...v1.0.214

v1.0.213

Full Changelog: anthropics/claude-code-action@v1.0.212...v1.0.213

v1.0.212

Full Changelog: anthropics/claude-code-action@v1.0.211...v1.0.212

v1.0.211

Full Changelog: anthropics/claude-code-action@v1.0.210...v1.0.211

v1.0.210

Full Changelog: anthropics/claude-code-action@v1.0.209...v1.0.210

v1.0.209

Full Changelog: anthropics/claude-code-action@v1.0.208...v1.0.209

v1.0.208

Full Changelog: anthropics/claude-code-action@v1.0.207...v1.0.208

v1.0.207

Full Changelog: anthropics/claude-code-action@v1.0.206...v1.0.207

Commits
  • fa2b266 chore: bump Claude Code to 2.1.259 and Agent SDK to 0.3.259
  • 8251c10 chore: bump Claude Code to 2.1.258 and Agent SDK to 0.3.258
  • 781d62e chore: bump Claude Code to 2.1.257 and Agent SDK to 0.3.257
  • 833fb0f chore: bump Claude Code to 2.1.252 and Agent SDK to 0.3.252
  • a874e9e chore: bump Claude Code to 2.1.251 and Agent SDK to 0.3.251
  • a60f3e1 chore: bump Claude Code to 2.1.250 and Agent SDK to 0.3.250
  • e8c2d7c chore: bump Claude Code to 2.1.248 and Agent SDK to 0.3.248
  • 70fec18 chore: bump Claude Code to 2.1.247 and Agent SDK to 0.3.247
  • See full diff in compare view

Updates r-lib/actions/setup-r from 2.12.1 to 2.13.0

Changelog

Sourced from r-lib/actions/setup-r's changelog.

v2.13.0 (2026-08028)

  • [setup-r] now retries r-hub.io HTTP failures (#1088, @​nbenn).

  • [setup-r] now sets the correct RTOOLS environment variables on aarch64 Windows (@​vjymisal0, #1104).

  • [setup-r] keep repositories if they are set by the build. E.g. aarch64 Windows builds now set them (@​jeroen, #1101).

  • [setup-r] now retries transient failures when resolving the R version from api.r-hub.io, rather than failing the job on the first timeout or server error (@​nbenn, #1086).

  • [setup-r-dependencies] now switches back to classic sudo, if available, on Linux. This fixes installing pak on Ubuntu 26.04 runners (@​jeroen, #1096).

v2.12.1 (2026-06-23)

  • [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

  • [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

  • Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

  • New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

  • All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

  • [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

  • It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

  • [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

  • [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

... (truncated)

Commits
  • 465b7d8 NEWS for 2.13.0 (#1105)
  • d06a540 [setup-r] retry transient r-hub.io request failures (#1088)
  • ed9aa85 fix(setup-r): export correct RTOOLS HOME env vars on Windows ARM64 and x64 (#...
  • c86f32c setup-r-dependencies: set JAVA_HOME on Windows runners from Java 21 env vars ...
  • 2a66450 setup-r-dependencies: switch back to classic sudo on runners with sudo-rs (#1...
  • 5cc1f0d Fix minor typo (#1098)
  • 33d09fb fix: Remove stray ::group:: (#1103)
  • aae88a2 Special-case CRAN mirror for Windows ARM64 (#1101)
  • b7484da [setup-r] Support installing RTools without installing R (#1093)
  • See full diff in compare view

Updates r-lib/actions/setup-r-dependencies from 2.12.1 to 2.13.0

Changelog

Sourced from r-lib/actions/setup-r-dependencies's changelog.

v2.13.0 (2026-08028)

@dependabot
ci(deps): bump the github-actions group across 6 directories with 9 u…
6b6034b 
…pdates

Bumps the github-actions group with 9 updates in the / directory:

| Package | From | To |
| --- | --- | --- |
| [r-lib/actions/setup-r](https://github.com/r-lib/actions) | `2.12.1` | `2.13.0` |
| [r-lib/actions/setup-r-dependencies](https://github.com/r-lib/actions) | `2.12.1` | `2.13.0` |
| [anthropics/claude-code-action](https://github.com/anthropics/claude-code-action) | `1.0.206` | `1.0.214` |
| [r-lib/actions/setup-pandoc](https://github.com/r-lib/actions) | `2.12.1` | `2.13.0` |
| [r-lib/actions/setup-renv](https://github.com/r-lib/actions) | `2.12.1` | `2.13.0` |
| [r-lib/actions/check-r-package](https://github.com/r-lib/actions) | `2.12.1` | `2.13.0` |
| [actions/ai-inference](https://github.com/actions/ai-inference) | `2.1.1` | `3` |
| [r-lib/actions/pr-fetch](https://github.com/r-lib/actions) | `2.12.1` | `2.13.0` |
| [r-lib/actions/pr-push](https://github.com/r-lib/actions) | `2.12.1` | `2.13.0` |

Bumps the github-actions group with 1 update in the /.github/actions/run-claude-review-attempt directory: [anthropics/claude-code-action](https://github.com/anthropics/claude-code-action).
Bumps the github-actions group with 2 updates in the /check-bibliography-dois directory: [r-lib/actions/setup-r](https://github.com/r-lib/actions) and [r-lib/actions/setup-r-dependencies](https://github.com/r-lib/actions).
Bumps the github-actions group with 3 updates in the /preview directory: [r-lib/actions/setup-r](https://github.com/r-lib/actions), [r-lib/actions/setup-r-dependencies](https://github.com/r-lib/actions) and [r-lib/actions/setup-renv](https://github.com/r-lib/actions).
Bumps the github-actions group with 3 updates in the /quarto-publish directory: [r-lib/actions/setup-r](https://github.com/r-lib/actions), [r-lib/actions/setup-r-dependencies](https://github.com/r-lib/actions) and [r-lib/actions/setup-renv](https://github.com/r-lib/actions).
Bumps the github-actions group with 2 updates in the /test-coverage directory: [r-lib/actions/setup-r](https://github.com/r-lib/actions) and [r-lib/actions/setup-r-dependencies](https://github.com/r-lib/actions).


Updates `r-lib/actions/setup-r` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-r-dependencies` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `anthropics/claude-code-action` from 1.0.206 to 1.0.214
- [Release notes](https://github.com/anthropics/claude-code-action/releases)
- [Commits](anthropics/claude-code-action@1f291e1...fa2b266)

Updates `r-lib/actions/setup-pandoc` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-renv` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/check-r-package` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `actions/ai-inference` from 2.1.1 to 3
- [Release notes](https://github.com/actions/ai-inference/releases)
- [Commits](actions/ai-inference@a780588...2c43c91)

Updates `r-lib/actions/pr-fetch` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/pr-push` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `anthropics/claude-code-action` from 1.0.206 to 1.0.214
- [Release notes](https://github.com/anthropics/claude-code-action/releases)
- [Commits](anthropics/claude-code-action@1f291e1...fa2b266)

Updates `r-lib/actions/setup-r` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-r-dependencies` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-r` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-r-dependencies` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-renv` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-r` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-r-dependencies` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-renv` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-r` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

Updates `r-lib/actions/setup-r-dependencies` from 2.12.1 to 2.13.0
- [Release notes](https://github.com/r-lib/actions/releases)
- [Changelog](https://github.com/r-lib/actions/blob/v2-branch/NEWS.md)
- [Commits](r-lib/actions@d3c5be5...465b7d8)

---
updated-dependencies:
- dependency-name: r-lib/actions/setup-r
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-r-dependencies
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: anthropics/claude-code-action
  dependency-version: 1.0.214
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-pandoc
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-renv
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/check-r-package
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: actions/ai-inference
  dependency-version: '3'
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: github-actions
- dependency-name: r-lib/actions/pr-fetch
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/pr-push
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: anthropics/claude-code-action
  dependency-version: 1.0.214
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-r
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-r-dependencies
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-r
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-r-dependencies
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-renv
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-r
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-r-dependencies
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-renv
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-r
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: r-lib/actions/setup-r-dependencies
  dependency-version: 2.13.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot Bot added dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code labels Sep 5, 2026
@github-actions
github-actions Bot requested a review from d-morrison September 5, 2026 23:11
@d-morrison
d-morrison merged commit c2251f6 into main Sep 6, 2026
67 of 68 checks passed
@d-morrison
d-morrison deleted the dependabot/github_actions/github-actions-743de4f73e branch September 6, 2026 19:15
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

@d-morrison d-morrison Awaiting requested review from d-morrison

Assignees

No one assigned

Labels

dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code

Projects

None yet

Milestone

No milestone

Development

Successfully merging this pull request may close these issues.

1 participant

@d-morrison