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Ember dandi integration with OSB - #17
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D-GopalKrishna wants to merge 13 commits into
Open
D-GopalKrishna wants to merge 13 commits into
D-GopalKrishna wants to merge 13 commits into
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Left for dev environment to be tested fully:
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Task description:
Researchers upload their data to EMBER-DANDI instead of the public bucket, and the
analysis runs on it in OSB as before. Each run ends with a DOI for their data.
EMBER login opens in a popup. One Logout signs out of both. Users are assumed to
have an approved EMBER account already (EMBER has its own approval process).
protocol), and optionally a copy into the protocol's MAABCD dandiset ("Share a copy of
this data with the MAABCD consortium", on by default) through OSB's new
/emberendpoints. OSB imports the researcher's copy into the workspace and runs the notebooks.
resources"), so choosing a protocol offers the researcher's dandisets with their workspaces.
version; the dialog shows its DOI with Copy. The MAABCD dandiset is never published.
and closing the dialog doesn't lose a run in progress.
logged in only while it has a token, visible disabled buttons, comment tidy-up.
Screenshots of some of the changes:
The two upload looks like (continuing to keep one logout - which will logout from both)
Login with Ember looks like this for the first time. (We assume user has a ember account - there's no signup process here for Ember like OSB - since Ember needs an approval process - which is something user is expected to do in ember official website)
Notice the Related resources section in Ember Dandiset - it takes it from the metadata coming from the upload.
One can continue from where it failed - so if one of the steps got failed - retry continues from where it failed.
Selecting the same Ember dandiset will show up something like below - since you have published previosuly and new upload does a new publishing to give you new DOI from the same Dandiset.