gloom/CITATION.cff at main · omicscodeathon/gloom · GitHub

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cff-version: 1.2.0
message: "If you use GLOOM in your work, please cite it using the metadata below."
title: "GLOOM: Gene network Learning and Organization through Optimized Machine intelligence"
abstract: >-
  A modular, reproducible Python pipeline for disease-gene prioritization that integrates
  differential expression, disease-conditioned co-expression networks, machine learning and
  positive-unlabeled learning, with a lung adenocarcinoma (LUAD) case study.
type: software
version: 0.2.0
# TODO: set the real release date when the release is tagged (see docs/RELEASE_CHECKLIST.md).
date-released: "2026-10-06"
# TODO: replace the placeholder DOI with the concept/version DOI minted by Zenodo for the tagged release.
doi: "10.5281/zenodo.XXXXXXX"
license: MIT
repository-code: "https://github.com/omicscodeathon/gloom"
url: "https://github.com/omicscodeathon/gloom"
keywords:
  - bioinformatics
  - machine-learning
  - lung-adenocarcinoma
  - gene-prioritization
  - co-expression-network
  - positive-unlabeled-learning
authors:
  - family-names: "Abdelsalam"
    given-names: "Rahma Y."
    email: "rahmayasserm@gmail.com"
  - family-names: "Abu-Zeid"
    given-names: "Rana H."
    email: "ranahamed2111@gmail.com"
  - family-names: "Traore"
    given-names: "Malick"
    email: "malicktra100@gmail.com"
  - family-names: "Rogo"
    given-names: "Khadija Adam"
    email: "khadijarogo212@gmail.com"
  - family-names: "Awe"
    given-names: "Olaitan I."
    email: "laitanawe@gmail.com"