From 9eec327e550d75b4836868e221cbeadb61fc06e4 Mon Sep 17 00:00:00 2001
From: Johannes Keller <16795031+jjokella@users.noreply.github.com>
Date: Thu, 17 Sep 2026 14:46:52 +0200
Subject: [PATCH 1/4] Fix directory path in quick start instructions

Updated the directory path for cloning the wuestebach repository in the quick start guide.
---
 docs/users_guide/introduction/quick_start.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/users_guide/introduction/quick_start.md b/docs/users_guide/introduction/quick_start.md
index cd491cd66..481b33197 100644
--- a/docs/users_guide/introduction/quick_start.md
+++ b/docs/users_guide/introduction/quick_start.md
@@ -67,7 +67,7 @@ cd TSMP2
 3. Set up a simulation experiment.
 
 ```sh
-cd /share
+cd ..
 git clone https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_eclm_wuestebach_sp.git
 cd extpar_eclm_wuestebach_sp/static.resources
 generate_wtb_namelists.sh 1x1_wuestebach

From ba9cbf5b6f600d9c48c220bcdb5284cb5ef8010c Mon Sep 17 00:00:00 2001
From: Johannes Keller <jo.keller@fz-juelich.de>
Date: Thu, 17 Sep 2026 15:33:56 +0200
Subject: [PATCH 2/4] adding ./ for running script

---
 docs/users_guide/introduction/quick_start.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/users_guide/introduction/quick_start.md b/docs/users_guide/introduction/quick_start.md
index 481b33197..a5f01f42b 100644
--- a/docs/users_guide/introduction/quick_start.md
+++ b/docs/users_guide/introduction/quick_start.md
@@ -70,7 +70,7 @@ cd TSMP2
 cd ..
 git clone https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_eclm_wuestebach_sp.git
 cd extpar_eclm_wuestebach_sp/static.resources
-generate_wtb_namelists.sh 1x1_wuestebach
+./generate_wtb_namelists.sh 1x1_wuestebach
 ```
 
 4. Run eCLM.

From 0ac7a19671c5b4712a628f0283ba57af4de5cf93 Mon Sep 17 00:00:00 2001
From: Johannes Keller <jo.keller@fz-juelich.de>
Date: Thu, 17 Sep 2026 16:24:31 +0200
Subject: [PATCH 3/4] JSC-HPC additions (Slurm environment)

- jobscript.slurm
- symlinks
- environment file
- sbatch command
---
 docs/users_guide/introduction/quick_start.md | 37 +++++++++++++++++++-
 1 file changed, 36 insertions(+), 1 deletion(-)

diff --git a/docs/users_guide/introduction/quick_start.md b/docs/users_guide/introduction/quick_start.md
index a5f01f42b..593fd7341 100644
--- a/docs/users_guide/introduction/quick_start.md
+++ b/docs/users_guide/introduction/quick_start.md
@@ -73,7 +73,42 @@ cd extpar_eclm_wuestebach_sp/static.resources
 ./generate_wtb_namelists.sh 1x1_wuestebach
 ```
 
-4. Run eCLM.
+4a. (ONLY on JSC systems) Set up the run directory with symlinks and a
+job script.
+
+```sh
+cd 1x1_wuestebach
+
+# Symlink the eCLM executable and the JSC environment file
+ln -s ../../../TSMP2/bin/JUWELS_eCLM/bin/eclm.exe eclm.exe
+ln -s ../../../TSMP2/bin/JUWELS_eCLM/jsc.2025.intel.psmpi loadenvs
+
+cat > jobscript.slurm << 'EOF'
+#!/usr/bin/env bash
+#SBATCH --job-name=1x1_wuestebach
+#SBATCH --nodes=1
+#SBATCH --ntasks-per-node=48
+#SBATCH --account=jibg36
+#SBATCH --partition=batch
+#SBATCH --time=0:30:00
+#SBATCH --output=logs/%j.eclm.1x1_wuestebach.out
+#SBATCH --error=logs/%j.eclm.1x1_wuestebach.err
+
+# Load environment
+source loadenvs
+
+# Run model
+srun -n $SLURM_NTASKS eclm.exe
+EOF
+```
+
+Run eCLM:
+```sh
+# On JSC systems (submit via Slurm):
+sbatch jobscript.slurm
+```
+
+4b. (GENERIC HPC) Run eCLM.
 
 ```sh
 cd 1x1_wuestebach

From 83b864ae2404d8d4789c7a694c3f06a14f2e65af Mon Sep 17 00:00:00 2001
From: Johannes Keller <16795031+jjokella@users.noreply.github.com>
Date: Fri, 18 Sep 2026 09:24:43 +0200
Subject: [PATCH 4/4] Update quick start guide for git-lfs setup

Added instructions for downloading large files using git-lfs.
---
 docs/users_guide/introduction/quick_start.md | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/docs/users_guide/introduction/quick_start.md b/docs/users_guide/introduction/quick_start.md
index 593fd7341..3ea645110 100644
--- a/docs/users_guide/introduction/quick_start.md
+++ b/docs/users_guide/introduction/quick_start.md
@@ -71,6 +71,11 @@ cd ..
 git clone https://icg4geo.icg.kfa-juelich.de/ExternalReposPublic/tsmp2-static-files/extpar_eclm_wuestebach_sp.git
 cd extpar_eclm_wuestebach_sp/static.resources
 ./generate_wtb_namelists.sh 1x1_wuestebach
+
+# Download large files (possibly git-lfs needs to be configured)
+cd ..
+git lfs install
+git lfs pull
 ```
 
 4a. (ONLY on JSC systems) Set up the run directory with symlinks and a